The Copa Federación de España 2008–09 was the 16th staging of the Copa Federación de España, a knockout competition for Spanish football clubs in Segunda División B and Tercera División.
The competition began on 2 August 2008 and ended with the finals on 2 April and 15 April 2009, where Real Jaén became champion after defeating Rayo Vallecano B 4-1 on aggregate.
Autonomous Communities tournaments
Andalusia tournament
Final
Asturias tournament
Qualifying tournament
Group A
Semifinals
Final
Aragon tournament
Quarter-finals
Semifinals
Final
Balearic Islands tournament
Semifinals
Final
Canary Islands tournament
Semifinals
Final
Cantabria tournament
Semifinals
Final
Castile and León tournament
Qualifying round
Semifinals
Final
Castile-La Mancha tournament
Quarter-finals
Semifinals
Final
Catalunya tournament
Qualifying round
Final
Euskadi tournament
Final
Extremadura tournament
Qualifying round
| Talavera | 0 – 2 | UD Badajoz |
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| Santa Marta | 1 – 1 (p) | Jerez |
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| Extremadura | 0 – 3 | Díter Zafra |
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| Ciudad de Plasencia | 3 – 1 | Cacereño |
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Quarterfinals
| Villanovense | 5 – 0 | Ciudad de Plasencia |
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| Jerez | 1 – 1 (p) 3-4 | CD Badajoz |
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| UD Badajoz | 1 – 0 | Díter Zafra |
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Semifinal
| CD Badajoz | 1 – 3 | UD Badajoz |
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Final
| Villanovense | 0 – 1 | UD Badajoz |
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Galicia tournament
Qualifying round
Semifinals
Final
La Rioja tournament
Semifinals
| Calahorra | 1 – 1 (p) 3-5 | Haro |
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| Anguiano | 1 – 1 (p) 4-3 | Agoncillo |
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Final
Madrid tournament
Final
Murcia tournament
Quarter-finals
Semifinals
Final
Navarre tournament
Qualifying tournament
Group A
Final
Valencia tournament
Semifinal
Final
National tournament
National Qualifying round
Round of 32
Round of 16
Quarterfinals
Semifinals
Final
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